Well good news and bad news. It happened again at last nights gig, good news is i turned on screenflow and recorded it. At the beginning of the night the transitions were working fine. At least i know for sure the spinning cube was because i remember using it a few times. Then all of a sudden it random transitioned to one of the ones that is having the problem. i switched through a few of them and it looks like swinging doors, spinning cube, reflective swap, and maybe others i just didnt go through them all. Here is what happens:
http://www.youtube.com/watch?v=x5oYmvUWiuk There is no audio so dont freak out that you dont hear anything :) The problem continued until i turned everything off, i hope i can get this fixed. I love these transitions!!